g2l_150: Gene2Locus:150

In JMF47/recountNNLSdata: Pre-computed model matrices used by recountNNLS for tx abundance estimate

Description

This is a data.frame containing information on which genes should be processed together when calculating abundance using recountNNLS. Genes are combined when they have cross-mapped counts. This is for 150bp read length experiments.

Format

A matrix of dimension 19,950x2 containing the information linking genes.

locus

A locus identifier.

gene_id

Gene id, has match in emission probability matrices.

Author(s)

Jack Fu [e-mail]

Examples

## Not run: 
data(g2l)
head(g2l)
head(unique(g2l$locus))

## End(Not run)

JMF47/recountNNLSdata documentation built on May 19, 2019, 2:53 a.m.