Files in JMacDonaldPhD/REpi
Pseudo-Marginal Analysis of partially observed Epidemics
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/Bootstrap_PF.R
R/ISMCMC.R
R/ImportanceSampler.R
R/PsMCMC.R
R/VmetaSIR.R
R/adapt_BS_PF.R
R/adapt_IS.R
R/adapt_ISMCMC.R
R/adapt_PsMCMC.R
R/adapt_particleMCMC.R
R/ascCase.R
R/caseAscObsModel.R
R/epiModel_llh.R
R/epiModel_sim.R
R/generic_PF.R
R/metaSIR.R
R/metaSIR_NC.R
R/oneDayConditioned_proposal.R
R/particleMCMC.R
R/plotMCMC.R
R/testing.R
R/utils.R
R/vector_bootstrap_PF.R
README.md
data/sim_sample.rda
examples/REpi_ex_workflow.R
man/BS_PF.Rd
man/IS.Rd
man/ISMCMC.Rd
man/PsMCMC.Rd
man/VBS_PF.Rd
man/adapt_BS_PF.Rd
man/adapt_IS.Rd
man/adapt_ISMCMC.Rd
man/adapt_PsMCMC.Rd
man/adapt_particleMCMC.Rd
man/caseAscObsModel.Rd
man/generic_PF.Rd
man/llh.Rd
man/metaSIR.Rd
man/metaSIR_NC.Rd
man/oneDayConditioned_proposal.Rd
man/particleMCMC.Rd
man/plotMCMC.Rd
man/r-slash-dcaseAscObsModel.Rd
man/sim.Rd
man/testingObsModel.Rd
vectorised_one_day_sim.R
