predictDistance_gsc: (Internal Function) Return list of calculated RNA distance...

In JackXu2333/dseAnalysis: Correlation analysis of RNA secondary structure mutation and differential expression

Description

Perform RNA distance calculation based on imported file or input of RNA original sequence and alternative sequence. The RNA distance calculation is based on the gscVisualizer R package algorithm by Zhiwen Tan, a BCB student from UofT.

Usage

predictDistance_gsc(name = c(), struct.ori = c(), struct.alt = c())

Arguments

name	List consisted with name of the RNA sequence in seq
struct.ori	List consisted with RNA orginal sequence
struct.alt	List consisted with RNA alternative sequence

Value

Returns a list of RNA distance, ordered according to the input name sequence

Author(s)

Sijie Xu, [e-mail]

References

Z Tan (2020). gscVisualizer: Visualize The Difference among Gene Sequences. R package version 0.1.0.

JackXu2333/dseAnalysis documentation built on Dec. 31, 2020, 1:09 p.m.