encodeSgeno: encode S genotype as columns using one-hot encoding
In JacobLemieux/sars2phylo: Functions for analyzing SARS-CoV-2 phylogenetic data
Description
Usage
Arguments
Value
Examples
Description
encode S genotype as columns using one-hot encoding
Usage
1
encodeSgeno(SS, spike = FALSE, smallversion = TRUE, N = 100)
Arguments
SS
dataframe of sample set
spike
restrict analysis only to Spike gene
smallversion
if true, limit number of genotypes to N
N
limits number of genotypes encoded
Value
dataframe augmented with columns as one-hot encoded genotypes
Examples
1
ss <- encodeGenotype(ss);
JacobLemieux/sars2phylo documentation built on Dec. 18, 2021, 12:29 a.m.
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Description Usage Arguments Value Examples
Description
encode S genotype as columns using one-hot encoding
Usage
1 | encodeSgeno(SS, spike = FALSE, smallversion = TRUE, N = 100)
|
Arguments
SS |
dataframe of sample set |
spike |
restrict analysis only to Spike gene |
smallversion |
if true, limit number of genotypes to N |
N |
limits number of genotypes encoded |
Value
dataframe augmented with columns as one-hot encoded genotypes
Examples
1 | ss <- encodeGenotype(ss);
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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