tests/testthat/_snaps/vascr_combine.md

In JamesHucklesby/vascr: Process Biological Impedance Sensing Data

Can combine dataframes

Code
  data2
Output
  # A tibble: 92,430 x 10
      Time Unit  Value Well  Sample       Frequency Experiment Instrument SampleID
     <dbl> <chr> <dbl> <chr> <chr>            <dbl> <fct>      <chr>         <int>
   1     5 Alpha  2.69 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   2     5 Alpha  2.89 A02   35,000_cell~         0 1 : 1 : E~ ECIS              1
   3     5 Alpha  2.71 A03   35,000_cell~         0 1 : 1 : E~ ECIS              1
   4     5 Alpha  2.52 B01   30,000_cell~         0 1 : 1 : E~ ECIS              2
   5     5 Alpha  2.69 B02   30,000_cell~         0 1 : 1 : E~ ECIS              2
   6     5 Alpha  2.34 B03   30,000_cell~         0 1 : 1 : E~ ECIS              2
   7     5 Alpha  2.15 C01   25,000_cell~         0 1 : 1 : E~ ECIS              3
   8     5 Alpha  2.35 C02   25,000_cell~         0 1 : 1 : E~ ECIS              3
   9     5 Alpha  2.4  C03   25,000_cell~         0 1 : 1 : E~ ECIS              3
  10     5 Alpha  1.85 D01   20,000_cell~         0 1 : 1 : E~ ECIS              4
  # i 92,420 more rows
  # i 1 more variable: Excluded <chr>

Code
  data3
Output
  # A tibble: 139,230 x 10
      Time Unit  Value Well  Sample       Frequency Experiment Instrument SampleID
     <dbl> <chr> <dbl> <chr> <chr>            <dbl> <fct>      <chr>         <int>
   1     5 Alpha  2.69 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   2     5 Alpha  2.89 A02   35,000_cell~         0 1 : 1 : E~ ECIS              1
   3     5 Alpha  2.71 A03   35,000_cell~         0 1 : 1 : E~ ECIS              1
   4     5 Alpha  2.52 B01   30,000_cell~         0 1 : 1 : E~ ECIS              2
   5     5 Alpha  2.69 B02   30,000_cell~         0 1 : 1 : E~ ECIS              2
   6     5 Alpha  2.34 B03   30,000_cell~         0 1 : 1 : E~ ECIS              2
   7     5 Alpha  2.15 C01   25,000_cell~         0 1 : 1 : E~ ECIS              3
   8     5 Alpha  2.35 C02   25,000_cell~         0 1 : 1 : E~ ECIS              3
   9     5 Alpha  2.4  C03   25,000_cell~         0 1 : 1 : E~ ECIS              3
  10     5 Alpha  1.85 D01   20,000_cell~         0 1 : 1 : E~ ECIS              4
  # i 139,220 more rows
  # i 1 more variable: Excluded <chr>

Code
  vascr_combine(experiment1r.df, experiment2r.df, experiment3.df)
Message
  ! Datasets have different non-identical timebases. Please resample one or more of these datasets before running this function again or graphs may not be properly generated.
  ! Datasets have different non-identical timebases. Please resample one or more of these datasets before running this function again or graphs may not be properly generated.
Output
  # A tibble: 64,575 x 10
      Time Unit  Value Well  Sample       Frequency Experiment Instrument SampleID
     <dbl> <chr> <dbl> <chr> <chr>            <dbl> <fct>      <chr>         <int>
   1   5   Alpha  2.69 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   2  26.1 Alpha  5.31 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   3  47.2 Alpha  4.8  A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   4  68.3 Alpha  3.94 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   5  89.4 Alpha  3.71 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   6 111.  Alpha  3.49 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   7 132.  Alpha  3.29 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   8 153.  Alpha  3.13 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
   9 174.  Alpha  2.93 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
  10 195   Alpha  2.71 A01   35,000_cell~         0 1 : 1 : E~ ECIS              1
  # i 64,565 more rows
  # i 1 more variable: Excluded <chr>

Code
  vascr_combine(experiment1r.df, experiment2r.df, experiment3.df) %>%
    vascr_check_resampled()
Message
  ! Datasets have different non-identical timebases. Please resample one or more of these datasets before running this function again or graphs may not be properly generated.
  ! Datasets have different non-identical timebases. Please resample one or more of these datasets before running this function again or graphs may not be properly generated.
Output
  [1] FALSE

Code
  vascr_combine(experiment1r.df, experiment2r.df, experiment3.df, resample = TRUE)
Output
  # A tibble: 17,850 x 10
     Unit  Well  Sample    Frequency Experiment Instrument SampleID Excluded Value
     <chr> <chr> <chr>         <dbl> <fct>      <chr>         <int> <chr>    <dbl>
   1 Alpha A01   35,000_c~         0 1 : 1 : E~ ECIS              1 no        2.69
   2 Alpha A01   35,000_c~         0 1 : 1 : E~ ECIS              1 no        4.58
   3 Alpha A01   35,000_c~         0 1 : 1 : E~ ECIS              1 no        3.60
   4 Alpha A01   35,000_c~         0 1 : 1 : E~ ECIS              1 no        3.17
   5 Alpha A01   35,000_c~         0 1 : 1 : E~ ECIS              1 no        2.71
   6 Alpha A02   35,000_c~         0 1 : 1 : E~ ECIS              1 no        2.89
   7 Alpha A02   35,000_c~         0 1 : 1 : E~ ECIS              1 no        4.40
   8 Alpha A02   35,000_c~         0 1 : 1 : E~ ECIS              1 no        3.64
   9 Alpha A02   35,000_c~         0 1 : 1 : E~ ECIS              1 no        3.18
  10 Alpha A02   35,000_c~         0 1 : 1 : E~ ECIS              1 no        2.9 
  # i 17,840 more rows
  # i 1 more variable: Time <dbl>

JamesHucklesby/vascr documentation built on July 16, 2025, 8:16 p.m.