patternGenes: Generate a list of data frames with ranked ordered genes from...
In Jaugust7/scVisualizeR: A package containing useful functions for single cell analysis
patternGenes R Documentation
Generate a list of data frames with ranked ordered genes from patterns found using NNLM::nnmf()
Description
Generate a list of data frames with ranked ordered genes from patterns found using NNLM::nnmf()
Usage
patternGenes(eset, decomp, num_genes)
Arguments
eset
an expression set or cell data set (CDS)
decomp
output from NNLM::nnmf()
num_genes
the number of genes per pattern you want to see
Value
Returns a list of data frames containing gene short names and gene weights for every patter
Jaugust7/scVisualizeR documentation built on Jan. 13, 2023, 1:12 p.m.
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| patternGenes | R Documentation |
Generate a list of data frames with ranked ordered genes from patterns found using NNLM::nnmf()
Description
Generate a list of data frames with ranked ordered genes from patterns found using NNLM::nnmf()
Usage
patternGenes(eset, decomp, num_genes)
Arguments
eset |
an expression set or cell data set (CDS) |
decomp |
output from NNLM::nnmf() |
num_genes |
the number of genes per pattern you want to see |
Value
Returns a list of data frames containing gene short names and gene weights for every patter
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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