get.annotation.dbtype: Get anor default databases type [sqlite, txt]
In JhuangLab/annovarR: Integrated Framework to Annotate Genetic Variants
Description
Usage
Arguments
Examples
Description
Get anor default databases type [sqlite, txt]
Usage
1
2
3
4
get.annotation.dbtype(
anno.name = "",
database.cfg = system.file("extdata", "config/databases.toml", package = "anor")
)
Arguments
anno.name
Annotation name, eg. avsnp138, avsnp147, 1000g2015aug_all
database.cfg
Configuration file of anor databases infomation
Examples
1
get.annotation.dbtype('avsnp147')
JhuangLab/annovarR documentation built on April 23, 2020, 10:51 p.m.
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Description Usage Arguments Examples
Description
Get anor default databases type [sqlite, txt]
Usage
1 2 3 4 | get.annotation.dbtype(
anno.name = "",
database.cfg = system.file("extdata", "config/databases.toml", package = "anor")
)
|
Arguments
anno.name |
Annotation name, eg. avsnp138, avsnp147, 1000g2015aug_all |
database.cfg |
Configuration file of anor databases infomation |
Examples
1 | get.annotation.dbtype('avsnp147')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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