API for JhuangLab/ngstk
Next-Generation Sequencing (NGS) Data Analysis Toolkit

Global functions
batch_file Man page Source code
data_format_converter Source code
default_handler_api Source code
default_mhandler_api Source code
format_filenames Man page Source code
format_pp_meta_2_level Source code
format_pp_meta_age Man page Source code
format_pp_meta_fusions Man page Source code
format_pp_meta_gender Man page Source code
fusions2oncoprinter Man page Source code
fusions2pp Man page Source code
fusions2pp_meta Man page Source code
fusions_filter Man page Source code
fusions_filter_handler Source code
fusions_filter_mhandler Source code
get_config_value Source code
get_files Source code
get_files_ctime Man page Source code
get_files_mtime Man page Source code
get_pp_samplegroup Man page Source code
get_split_seqs Man page Source code
get_valid_col_index Source code
handler Source code
handler_default_value Source code
handler_extract Source code
handler_lower Source code
handler_na_replace Source code
handler_postfix Source code
handler_prefix Source code
handler_replace Source code
handler_split Source code
handler_upper Source code
handler_value_map Source code
initial_params Source code
merge_table_files Man page Source code
mhandler Source code
mhandler_fusions_any_match Source code
mhandler_fusions_anyfull_match Source code
mhandler_fusions_full_match Source code
mhandler_fusions_left_match Source code
mhandler_fusions_right_match Source code
muts2mutation_mapper Man page Source code
muts2oncoprinter Man page Source code
muts2pp Man page Source code
ngstk Man page
ngstk-package Man page
set_colors Man page Source code
set_tools Man page Source code
show_handlers Man page Source code
show_mhandlers Man page Source code
split_col_data Man page Source code
split_list Man page Source code
split_row_data Man page Source code
split_row_file Man page Source code
supress_any_message Man page Source code
JhuangLab/ngstk documentation built on March 19, 2018, 9:56 p.m.