Files in JinmiaoChenLab/cytofkit
cytofkit: an integrated mass cytometry data analysis pipeline

.gitignore
DESCRIPTION
NAMESPACE
R/ClusterX.R R/DensVM.R R/RcppExports.R R/Rphenograph.R R/cytof_cluster.R R/cytof_dimensionReduction.R R/cytof_postProcess.R R/cytof_preProcess.R R/cytof_progression.R R/cytofkit.R R/cytofkit_GUI.R R/cytofkit_shinyAPP.R README.md
_config.yml
inst/CITATION
inst/NEWS.Rd
inst/extdata/130515_C2_stim_CD19-.fcs
inst/extdata/demo_fcs.RData
inst/extdata/help.gif
inst/extdata/help.png
inst/extdata/parameter.txt
inst/shiny/global.R inst/shiny/server.R inst/shiny/ui.R inst/unitTests/test_cytof_dimReduction.R man/ClusterX.Rd man/DensVM.Rd man/Rphenograph.Rd man/cytof_addToFCS.Rd man/cytof_cluster.Rd man/cytof_clusterMtrx.Rd man/cytof_clusterPlot.Rd man/cytof_clusterStat.Rd man/cytof_colorPlot.Rd man/cytof_dimReduction.Rd man/cytof_exprsExtract.Rd man/cytof_exprsMerge.Rd man/cytof_heatmap.Rd man/cytof_progression.Rd man/cytof_progressionPlot.Rd man/cytof_writeResults.Rd man/cytofkit-package.Rd man/cytofkit.Rd man/cytofkitNews.Rd man/cytofkitShinyAPP.Rd man/cytofkit_GUI.Rd man/fixedLogicleParameters_GUI.Rd man/getParameters_GUI.Rd man/launchShinyAPP_GUI.Rd man/spectral1.Rd man/spectral2.Rd
src/.gitignore
src/RcppExports.cpp
src/cytofkit.dll
src/jaccard_coeff.cpp
tests/runTests.R
vignettes/cluster_panel.png
vignettes/cytofkit_GUI.png
vignettes/cytofkit_example.Rmd
vignettes/cytofkit_pipeline.png
vignettes/cytofkit_shinyAPP.Rmd vignettes/cytofkit_workflow.Rmd
vignettes/load2shiny.png
vignettes/logo.png
vignettes/marker_panel.png
vignettes/progression_panel.png
vignettes/sample_panel.png
JinmiaoChenLab/cytofkit documentation built on March 22, 2018, 3:20 a.m.