CnvGSAOutput-class: Class '"CnvGSAOutput"'

In JoeLugo/cnvGSA: Gene Set Analysis of (Rare) Copy Number Variants

Description

Container class for the output structures produced by the main function (i.e. cnvGSAlogRegTest()).

Slots

phData.ls:

Object of class "list" containing phenotype and covariate data.

res.ls:

Object of class "list" containing burden analysis results for gene-sets.

gsTables.ls:

Object of class "list" containing the gene-set tables.

gsData.ls:

Object of class "list" containing gene-set data.

Methods

gsTables.ls

signature(obj = "CnvGSAOutput"): Gets gsTables.ls.

res.ls

signature(obj = "CnvGSAOutput"): Gets res.ls.

phData.ls

signature(obj = "CnvGSAOutput"): Gets phData.ls.

gsData.ls

signature(obj = "CnvGSAOutput"): Gets gsData.ls.

Author(s)

Joseph Lugo [e-mail]

Examples

## See vignette for full details and worked example

JoeLugo/cnvGSA documentation built on May 28, 2019, 12:55 p.m.