Files in JuanXie19/LRT
LRT (Lineage estimation by integrative analysis of single-cell RNA-seq and TCR-seq data)
.Rhistory
DESCRIPTION
LRT.Rproj
NAMESPACE
R/AllClasses.r
R/AllGenerics.r
R/HelperFuntions.r
R/getCombinedDataSet.r
R/getOverallTrajectory.R
R/repertoire.r
R/shinyClone.r
R/shinyClust.r
R/utils.r
README.md
man/CombinedDataSet-class.Rd
man/TrajectoryDataSet-class.Rd
man/clonalDiversity.Rd
man/clonalOverlap.Rd
man/clonalProportion.Rd
man/diversityCall.Rd
man/expression2List.Rd
man/expression2List_seurat.Rd
man/getCirclize.Rd
man/getClonotypeLineages.Rd
man/getCombinedDataSet-data.frame-Seurat-method.Rd
man/getCombinedDataSet.Rd
man/getOverallTrajectory-CombinedDataSet-method.Rd
man/getShinyInput.Rd
man/getTCRs.Rd
man/grabMeta.Rd
man/grabMeta_seurat.Rd
man/jaccardIndex.Rd
man/list.input.return.Rd
man/lrtLineages.Rd
man/lrtParams.Rd
man/morisitaIndex.Rd
man/occupiedscRepertoire.Rd
man/overlapIndex.Rd
man/reducedDim.Rd
man/seuratClusterLabels.Rd
man/shinyClone.Rd
man/shinyClust.Rd
