Files in KarstensLab/microshades
A custom color palette for improving data visualization
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/color_mapping_functions.R
R/custom_legend.R
R/palettes.R
R/plot_functions.R
README.Rmd
README.md
_pkgdown.yml
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/index.html
docs/articles/microshades-CMD.html
docs/articles/microshades-CMD_files/anchor-sections-1.0/anchor-sections.css
docs/articles/microshades-CMD_files/anchor-sections-1.0/anchor-sections.js
docs/articles/microshades-CMD_files/figure-html/unnamed-chunk-10-1.png
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docs/articles/microshades-CMD_files/figure-html/unnamed-chunk-9-1.png
docs/articles/microshades-CMD_files/figure-html/unnamed-chunk-9-2.png
docs/articles/microshades-CMD_files/header-attrs-2.5/header-attrs.js
docs/articles/microshades-GP.html
docs/articles/microshades-GP_files/anchor-sections-1.0/anchor-sections.css
docs/articles/microshades-GP_files/anchor-sections-1.0/anchor-sections.js
docs/articles/microshades-GP_files/figure-html/unnamed-chunk-10-1.png
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docs/articles/microshades-GP_files/figure-html/unnamed-chunk-9-2.png
docs/articles/microshades-GP_files/figure-html/unnamed-chunk-9-3.png
docs/articles/microshades-GP_files/header-attrs-2.5/header-attrs.js
docs/articles/microshades-HMP.html
docs/articles/microshades-HMP_files/anchor-sections-1.0/anchor-sections.css
docs/articles/microshades-HMP_files/anchor-sections-1.0/anchor-sections.js
docs/articles/microshades-HMP_files/figure-html/unnamed-chunk-4-1.png
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docs/articles/microshades-HMP_files/figure-html/unnamed-chunk-7-1.png
docs/articles/microshades-HMP_files/header-attrs-2.5/header-attrs.js
docs/articles/microshades-legend_customization.html
docs/articles/microshades-legend_customization_files/figure-html/unnamed-chunk-4-1.png
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docs/articles/microshades-sample_reordering.html
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docs/articles/microshades-sample_reordering_files/figure-html/unnamed-chunk-8-1.png
docs/articles/non-microbiome_data.html
docs/articles/non-microbiome_data_files/anchor-sections-1.0/anchor-sections.css
docs/articles/non-microbiome_data_files/anchor-sections-1.0/anchor-sections.js
docs/articles/non-microbiome_data_files/figure-html/plot example-1.png
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docs/articles/non-microbiome_data_files/header-attrs-2.5/header-attrs.js
docs/articles/remove_na_option.html
docs/articles/remove_na_option_files/figure-html/default_behavior-1.png
docs/articles/remove_na_option_files/figure-html/nondefault_behavior-1.png
docs/articles/titanic_data_example.html
docs/articles/titanic_data_example_files/anchor-sections-1.0/anchor-sections.css
docs/articles/titanic_data_example_files/anchor-sections-1.0/anchor-sections.js
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docs/articles/titanic_data_example_files/header-attrs-2.5/header-attrs.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/Rplot002.png
docs/reference/Rplot003.png
docs/reference/Rplot004.png
docs/reference/Rplot005.png
docs/reference/Rplot006.png
docs/reference/color_reassign.html
docs/reference/create_color_dfs.html
docs/reference/custom_legend.html
docs/reference/default_hex.html
docs/reference/extend_group.html
docs/reference/figures/README-blue-1.png
docs/reference/figures/README-cvd_blue-1.png
docs/reference/figures/README-plot example-1.png
docs/reference/figures/README-unnamed-chunk-4-1.png
docs/reference/figures/README-unnamed-chunk-5-1.png
docs/reference/figures/blue-1.png
docs/reference/figures/cvd_blue-1.png
docs/reference/figures/microshades_all.png
docs/reference/figures/microshades_cvd_palettes.png
docs/reference/figures/microshades_cvd_palettes_cvd.png
docs/reference/figures/microshades_hex_logo.png
docs/reference/figures/microshades_logo.png
docs/reference/figures/microshades_palettes.png
docs/reference/figures/microshades_palettes_cvd.png
docs/reference/figures/penguin_example.png
docs/reference/figures/plot example-1.png
docs/reference/figures/plot_CMD.png
docs/reference/index.html
docs/reference/individual_legend.html
docs/reference/match_cdf.html
docs/reference/match_color_df.html
docs/reference/microshades_cvd_palettes-1.png
docs/reference/microshades_cvd_palettes-2.png
docs/reference/microshades_cvd_palettes-3.png
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docs/reference/microshades_cvd_palettes.html
docs/reference/microshades_palette-1.png
docs/reference/microshades_palette-2.png
docs/reference/microshades_palette-3.png
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docs/reference/microshades_palette.html
docs/reference/microshades_palettes-1.png
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docs/reference/microshades_palettes.html
docs/reference/plot_contributions.html
docs/reference/plot_microshades.html
docs/reference/prep_mdf.html
docs/reference/reorder_samples_by.html
docs/sitemap.xml
man/color_reassign.Rd
man/create_color_dfs.Rd
man/custom_legend.Rd
man/default_hex.Rd
man/extend_group.Rd
man/figures/README-blue-1.png
man/figures/README-cvd_blue-1.png
man/figures/README-plot example-1.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/blue-1.png
man/figures/cvd_blue-1.png
man/figures/microshades_all.png
man/figures/microshades_cvd_palettes.png
man/figures/microshades_cvd_palettes_cvd.png
man/figures/microshades_hex_logo.png
man/figures/microshades_logo.png
man/figures/microshades_palettes.png
man/figures/microshades_palettes_cvd.png
man/figures/penguin_example.png
man/figures/plot example-1.png
man/figures/plot_CMD.png
man/individual_legend.Rd
man/match_cdf.Rd
man/microshades_cvd_palettes.Rd
man/microshades_palette.Rd
man/microshades_palettes.Rd
man/plot_contributions.Rd
man/plot_microshades.Rd
man/prep_mdf.Rd
man/reorder_samples_by.Rd
microshades.Rproj
tests/testthat.R
tests/testthat/test-color_assignment.R
tests/testthat/test-palettes.R
vignettes/.gitignore
vignettes/microshades-GP.Rmd
vignettes/microshades-HMP.Rmd
vignettes/microshades-legend_customization.Rmd
vignettes/microshades-sample_reordering.Rmd
vignettes/non-microbiome_data.Rmd
vignettes/remove_na_option.Rmd
vignettes/titanic_data_example.Rmd
