API for KasperThystrup/EncircleR
EncircleR
| Global functions | |
|---|---|
| EnsDbExtremities | Man page Source code |
| app_server | Source code |
| app_sys | Source code |
| app_ui | Source code |
| arbitrayFilterStats | Man page |
| attachSTARGenome | Source code |
| availableEnsemblReleases | Man page Source code |
| callSTAR | Source code |
| checkMetadataFilepaths | Man page |
| chimericReadStats | Source code |
| col_1 | Source code |
| col_10 | Source code |
| col_12 | Source code |
| col_2 | Source code |
| col_3 | Source code |
| col_4 | Source code |
| col_6 | Source code |
| col_8 | Source code |
| determineExtremities | Man page Source code |
| dettachSTARGenome | Source code |
| display | Source code |
| downloadFile | Man page Source code |
| drop_nulls | Source code |
| enurl | Source code |
| extractEnsemblReleaseNumerics | Man page Source code |
| extractReferenceMeta | Man page Source code |
| fastpCommand | Source code |
| fileExt | Man page Source code |
| generateSTARidx | Man page Source code |
| getDownloadLinks | Man page Source code |
| get_golem_config | Source code |
| golem_add_external_resources | Source code |
| importMetadata | Man page Source code |
| jq_hide | Source code |
| listReferences | Source code |
| list_to_li | Source code |
| list_to_p | Source code |
| makeTables | Man page Source code |
| mod_STAR_call_server | Source code |
| mod_STAR_call_ui | Source code |
| mod_STAR_idx_server | Source code |
| mod_STAR_idx_ui | Source code |
| mod_applyFilters_server | Source code |
| mod_applyFilters_ui | Source code |
| mod_callFastp_server | Source code |
| mod_callFastp_ui | Source code |
| mod_circTable_server | Source code |
| mod_circTable_ui | Source code |
| mod_deplyCirculaR_server | Source code |
| mod_deplyCirculaR_ui | Source code |
| mod_getAnnotation_server | Source code |
| mod_getAnnotation_ui | Source code |
| mod_importMetadata_server | Source code |
| mod_importMetadata_ui | Source code |
| mod_mappingPlots_server | Source code |
| mod_mappingPlots_ui | Source code |
| mod_selectReferences_server | Source code |
| mod_selectReferences_ui | Source code |
| mod_setupExperiment_server | Source code |
| mod_setupExperiment_ui | Source code |
| named_to_li | Source code |
| paste. | Source code |
| paste_ | Source code |
| paste_n | Source code |
| plotAlignmentPecentages | Source code |
| plotFiltrationStats | Man page Source code |
| plotReadStats | Source code |
| plotSpliceLibSize | Source code |
| reassignSampleFiles | Source code |
| referenceExtremities | Man page Source code |
| rep_br | Source code |
| run_app | Man page Source code |
| setupSampleFiles | Source code |
| setupSamplePaths | Source code |
| subsetAlignmentStatistics | Source code |
| supported_organisms | Man page |
| tagRemoveAttributes | Source code |
| undisplay | Source code |
| with_red_star | Source code |
