determineExtremities: Determine avialable releases based on extremities

In KasperThystrup/EncircleR: EncircleR

Description

Determine avialable releases based on extremities

Usage

determineExtremities(ens_extremes, ref_extremes)

Arguments

ens_extremes	A numeric vector with release numbers of the oldest and newest available annotation object
ref_extremes	A numeric vector with release numbers of the oldest and newest available reference files

Value

A numeric vector with Ensembl releases, containing both annotation object and reference files

Examples

#ah <- AnnotationHub()
#organism <- "Homo_sapiens"
#meta <- extractReferenceMeta(ah, organism)
#ref_extremes <- referenceExtremities(meta)
#ens_extremes <- EnsDbExtremities(queries)
#extremes <- determineExtremities(ens_extremes, ref_extremes)
#min_release <- extremes[1]
#max_release <- extremes[2]

KasperThystrup/EncircleR documentation built on March 21, 2021, 10:13 p.m.