lineage_info: Lineage Information
In KathrynCampbell/MADDOG: Lineage Designation and Assignment
lineage_info R Documentation
Lineage Information
Description
This function tests query sequences against a reference set of sequences and provides a lineage
assignment for the query sequences. It also returns information about each of the lineages assigned.
Usage
lineage_info(sequence_data, metadata)
Arguments
sequence_data
The output of the seq_designation function
metadata
The metadata corresponding to the sequences in the data table, including "ID" and "country"
Value
A table of information about each of the designated lineages
KathrynCampbell/MADDOG documentation built on April 14, 2025, 10:40 a.m.
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| lineage_info | R Documentation |
Lineage Information
Description
This function tests query sequences against a reference set of sequences and provides a lineage assignment for the query sequences. It also returns information about each of the lineages assigned.
Usage
lineage_info(sequence_data, metadata)
Arguments
sequence_data |
The output of the seq_designation function |
metadata |
The metadata corresponding to the sequences in the data table, including "ID" and "country" |
Value
A table of information about each of the designated lineages
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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