mafft_reorder: MAFFT Alignment with Reorder
In KathrynCampbell/MADDOG: Lineage Designation and Assignment
View source: R/mafft_reorder.R
mafft_reorder R Documentation
MAFFT Alignment with Reorder
Description
This function adds query sequences to a reference alignment and realigns all the sequences, allowing
reordering of the sequences
Usage
mafft_reorder(sequences, ref_align)
Arguments
sequences
The query sequences to be added to the reference alignment in fasta format
ref_align
The reference alignment to add the query sequences to in fasta format
Value
An alignment containing the query sequences and reference sequences
KathrynCampbell/MADDOG documentation built on April 14, 2025, 10:40 a.m.
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View source: R/mafft_reorder.R
| mafft_reorder | R Documentation |
MAFFT Alignment with Reorder
Description
This function adds query sequences to a reference alignment and realigns all the sequences, allowing reordering of the sequences
Usage
mafft_reorder(sequences, ref_align)
Arguments
sequences |
The query sequences to be added to the reference alignment in fasta format |
ref_align |
The reference alignment to add the query sequences to in fasta format |
Value
An alignment containing the query sequences and reference sequences
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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