gtex_eqtl: Multi-tissue eqtl
In KatrionaGoldmann/omicAnnotations: Use databases to annotate genomic and transcriptomic data
gtex_eqtl R Documentation
Multi-tissue eqtl
Description
Multi-tissue eqtl
Usage
gtex_eqtl(
genes = c("CYP26B1"),
snps = c("chr2_72209800_G_A"),
gene_snp_pairs = c(),
p_only = TRUE,
gencodeIDs = FALSE
)
Arguments
genes
A list of gene names in format genecode IDs
snps
SNPs. In format chr11_66561248_T_C
gene_snp_pairs
A data frame of gene-snp pairs with genes in the first
column and snps in the second
p_only
Whether to keep only the p-value statistics
KatrionaGoldmann/omicAnnotations documentation built on June 23, 2022, 2:15 p.m.
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| gtex_eqtl | R Documentation |
Multi-tissue eqtl
Description
Multi-tissue eqtl
Usage
gtex_eqtl(
genes = c("CYP26B1"),
snps = c("chr2_72209800_G_A"),
gene_snp_pairs = c(),
p_only = TRUE,
gencodeIDs = FALSE
)
Arguments
genes |
A list of gene names in format genecode IDs |
snps |
SNPs. In format chr11_66561248_T_C |
gene_snp_pairs |
A data frame of gene-snp pairs with genes in the first column and snps in the second |
p_only |
Whether to keep only the p-value statistics |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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