r_packages.R

In KevinTThomas/sle_activity_scrnaseq: sle_activity_scrnaseq

#! /usr/bin/R

BiocManager::install(
    c(
        'BiocNeighbors',
        'BiocParallel',
        'cowplot',
        'data.table',
        'chris-mcginnis-ucsf/MULTI-seq',
        'devtools',
        'dsb',
        'forcats',
        'furrr',
        'future',
        'future.apply',
        'ggplot2',
        'ggrepel',
        'glmGamPoi',
        'harmony',
        'here',
        'igraph',
        'janitor',
        'knitr',
        'markdown',
        'pheatmap',
        'parallel',
        'immunogenomics/presto',
        'purrr',
        'readr',
        'remotes',
        'rlang',
        'rmarkdown',
        'rsvd',
        'Seurat',
        'milescsmith/SeuratBubblePlot',
        'SeuratObject',
        'SoupX',
        'sp',
        'stringr',
        'tibble',
        'tidyr',
        'tinytex',
        'RColorBrewer',
        'grDevices',
        'ggpubr',
        'pals',
        'viridisLite',
        'scales',
        'viridis'
    )
)