snpgrou: Calculate metrics for how one or multiple locus is(are)...
In Kevinpen/SNPgrou: Association of SNP to Multiple Phenotypic Traits Group

Description Usage Arguments Value Examples

This function use linear discriminant analysis to classify response phenotype according to

1	snpgrou(x, rep)

`x`	A data frame containing one or multiple SNP data for every loucs, the first column is the phenotype data, follow by SNP data column. If SNP data not alraedy in "SNP" type, this function use prep function to prepare the data.
`rep`	Integer, the number of replication for the cross-validation procedures.

The results of gScore for each locus

require(MASS)
data(geneSNP)
snpgrou(geneSNP, 100)
# snp10001  snp10002  snp10003  snp10005  snp10008
# 0.3166901 0.8362573 0.3582222 0.3354503 0.3279649