tor_calculate_degradation_dissipation: Calculate degradation rate
In KopfLab/turnoveR: Processing tools for protein degradation experiments.
Description
Calculate degradataion and dissipation, including propagated error. Protein degradation is calculated as the labeling rate minus the growth rate (deg_rate = label_rate - growth_rate). Protein dissipation is calculated as the degradation rate divided by the labeling rate, and is displayed as a percent (dissipation = (deg_rate / label_rate)*100).
Usage
1
2
tor_calculate_degradation_dissipation(data, growth_rate, growth_rate_se = 0,
quiet = FALSE)
Arguments
data
data with label rate calculated
growth_rate
growth rate from experiment
growth_rate_se
standard error of growth rate from experiment
KopfLab/turnoveR documentation built on May 28, 2019, 3:33 p.m.
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Description
Calculate degradataion and dissipation, including propagated error. Protein degradation is calculated as the labeling rate minus the growth rate (deg_rate = label_rate - growth_rate). Protein dissipation is calculated as the degradation rate divided by the labeling rate, and is displayed as a percent (dissipation = (deg_rate / label_rate)*100).
Usage
1 2 | tor_calculate_degradation_dissipation(data, growth_rate, growth_rate_se = 0,
quiet = FALSE)
|
Arguments
data |
data with label rate calculated |
growth_rate |
growth rate from experiment |
growth_rate_se |
standard error of growth rate from experiment |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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