API for KrasnitzLab/CNprep
Pre-process DNA Copy Number (CN) Data for Detection of CN Events
| Global functions | |
|---|---|
| CNclusterNcenter | Man page Source code |
| CNprep | Man page |
| CNprep-package | Man page |
| CNpreprocessing | Man page Source code |
| EMexample | Man page |
| annotexample | Man page |
| applyCNPmask | Man page Source code |
| breakIntoCNPs.chrom | Man page Source code |
| breakIntoGaps | Man page Source code |
| centerprob | Man page Source code |
| cnpexample | Man page |
| consolidate | Man page Source code |
| containment.indicator | Man page Source code |
| get.center | Man page Source code |
| getz | Man page Source code |
| makeCNPmask | Man page Source code |
| makeCNPmask.chrom | Man page Source code |
| normalComparison | Man page Source code |
| normsegs | Man page |
| ratexample | Man page |
| segexample | Man page |
| segsample | Man page Source code |
| smad | Man page Source code |
| smedian | Man page Source code |
| smedian.sample | Man page Source code |
| smedmad | Man page Source code |
| validateCNpreprocessing | Man page Source code |
| validateMakeCNPmask | Man page Source code |
| weighted.median | Man page Source code |
