Description Usage Arguments Value
Given the incidence table for selected features (i.e. pinmat generated by
calc_pins
), computes the Fisher's test p-values for pairwise comparisons.
Also perform permutations on the incidence table and compute a set of
Fisher's test p-values for each permutation.
1 2 | sim_fisher_wrapper(pinmat_df, pins_df, njobs = NULL, nsim = 150,
nsweep = 200, seedme = 123)
|
pinmat_df |
The incidence table generated by |
pins_df |
The pin generated by |
nsim |
the number of permutations/simulations. Default value: 150. |
a list of two numeric vector objects. The Fisher's test p-values for the observation (true) and for the permutations (sim).
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