Man pages for LSSI-ETH/Ehling_Covid_2021
Plotting functions for Ehling_2021 (Cell Reports)
| barplot_isotype_usage | Barplot isotype usage |
| boxplot_v_identity | Boxplot for comparison of V_identity across samples |
| cdr_length_across_reps | Plot comparing CDR3 lengths across repertoies |
| clonal_expansion_rank | Faceted barplot showing isotype and frequency of top 10... |
| enrichment_heatmap_geom_tile | Heatmap of mAb enrichment using geom_tile |
| enrichment_heatmap_standard | Heatmap of mAb enrichment |
| heavy_light_comparisons | PLots comparing heavy and light chain usage |
| network_figure | Network plot of binders and closest found neighbors |
| pie_chart_isotype_usage | Sideways barplot |
| plot_isotype_usage_bar | Barplot isotype usage |
| plot_patients | Sideways barplot for patient timeline |
| supp_pool_analysis_132 | Generates supplementary plots characterizing the 132 chosen... |
| vj_across_reps | Plot comparing V,J usage across repertoires |
