variants_per_chromosome: A tools4ukbb function Function output: output a table with...
In Lab-Jaiswal/tools4ukbb: What the Package Does (One Line, Title Case)
variants_per_chromosome R Documentation
A tools4ukbb function
Function output: output a table with three columns: variant_ids, chromosome, index. Only one chromosome can be selected. This is for use in the get_variants function.
Description
A tools4ukbb function
Function output: output a table with three columns: variant_ids, chromosome, index. Only one chromosome can be selected. This is for use in the get_variants function.
Usage
variants_per_chromosome(chromosome, directory)
Arguments
chromosome
which chromosome you are selecting and how it is labeled (eg: for chromosome 2 of sample3_chr2.pvar, chromsome = "chr2" OR for s1_c2.pvar, chromosome = "c2")
directory
the directory with your pvar, pgen, and psam files
Examples
variants_per_chromosome()
Lab-Jaiswal/tools4ukbb documentation built on May 12, 2022, 9:11 a.m.
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| variants_per_chromosome | R Documentation |
A tools4ukbb function Function output: output a table with three columns: variant_ids, chromosome, index. Only one chromosome can be selected. This is for use in the get_variants function.
Description
A tools4ukbb function Function output: output a table with three columns: variant_ids, chromosome, index. Only one chromosome can be selected. This is for use in the get_variants function.
Usage
variants_per_chromosome(chromosome, directory)
Arguments
chromosome |
which chromosome you are selecting and how it is labeled (eg: for chromosome 2 of sample3_chr2.pvar, chromsome = "chr2" OR for s1_c2.pvar, chromosome = "c2") |
directory |
the directory with your pvar, pgen, and psam files |
Examples
variants_per_chromosome()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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