Files in LieberInstitute/brainstorm
Validating Sample Identiy Through RNA-seq and DNA Genotyping Correlation
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/check_cols.R
R/data.R
R/filter_called.R
R/grouper.R
R/make_corLong.R
R/make_snpsGeno.R
R/make_snpsRNA.R
R/utils.R
README.Rmd
README.md
codecov.yml
data-raw/brain_sentrix.R
data-raw/brain_sentrix_speaqeasy.csv
data-raw/genotyped.R
data-raw/mergedVariants.vcf.gz
data-raw/snpsCalled_VCF.R
data-raw/test_BrTable.R
data-raw/test_snps.R
data/.gitignore
data/brain_sentrix.rda
data/pd_example.rda
data/snpsCalled_VCF.rda
data/snpsGeno_VCF.rda
data/test_BrTable.rda
data/test_snps.rda
dev/01_create_pkg.R
dev/02_git_github_setup.R
dev/03_core_files.R
dev/04_update.R
images/flow_cor_group.png
images/flow_data_prep.png
inst/CITATION
inst/extdata/brain_sentrix.csv
man/brain_sentrix.Rd
man/figures/README-pressure-1.png
man/filter_called.Rd
man/grouper.Rd
man/make_corLong.Rd
man/make_snpsGeno.Rd
man/make_snpsRNA.Rd
man/pd_example.Rd
man/snpsCalled_VCF.Rd
man/snpsGeno_VCF.Rd
man/test_BrTable.Rd
man/test_snps.Rd
tests/testthat.R
tests/testthat/test-check_cols.R
tests/testthat/test-grouper.R
tests/testthat/test-make_corLong.R
vignettes/.gitignore
vignettes/Example_Run.Rmd
