check_spe | R Documentation |
This function checks that the spe
object has the appropriate structure.
For more details please check the vignette documentation.
check_spe(
spe,
variables = c("sum_umi", "sum_gene", "expr_chrM", "expr_chrM_ratio")
)
spe |
A
SpatialExperiment-class
object. See |
variables |
A |
The input object if all checks are passed.
Brenda Pardo, Leonardo Collado-Torres
Other Check input functions:
check_modeling_results()
,
check_sce()
,
check_sce_layer()
if (enough_ram()) {
## Obtain the necessary data
if (!exists("spe")) spe <- fetch_data("spe")
## Check the object
check_spe(spe)
}
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