R/variables_to_incorporate.R

In LisaHopcroft/CTutils: Helpful Functions for Clinical Trial Data Analysis at SCTRU (Public Health Scotland)

### Global Variables to incorporate from YML
# VERBOSE_REPORTING
# SILENT_REPORTING
# DATA_EXTRACT_RDAT_LOCATION
# XML_DSD_LOCATION
# FLAG.Flextable = this should be set by the script
# FLAG.Flextable = compareVersion( as.character(pandoc_version()),"2.0" ) >= 0
# parameter.vocabulary
# TRIAL.dose_scale = c( 2, 3, 5, 7, 10 )
# TRIAL.starting_dose = 5
# glossary.dictionary
# RECIST.COMPLETE_value = 10
# data_queries.list = NULL
# missing_data_limit = 10
# RECIST.COMPLETE_value = 10




### Acroynms to define
# SSR
# DSD
# CRF

### Functionality to develop
# - Accomodate different units for BMI (calculate_BMI)