Description Usage Arguments Value
Parallel implementation of cross validation.
1 2 3 4 5 6 | CVP_GLASSO(X = NULL, lam = 10^seq(-2, 2, 0.2), diagonal = FALSE,
crit.out = c("avg", "max"), crit.in = c("loss", "avg", "max"),
tol.out = 1e-04, tol.in = 1e-04, maxit.out = 10000, maxit.in = 10000,
adjmaxit.out = NULL, K = 5, crit.cv = c("loglik", "AIC", "BIC"),
start = c("warm", "cold"), cores = 1, trace = c("progress", "print",
"none"))
|
X |
nxp data matrix. Each row corresponds to a single observation and each column contains n observations of a single feature/variable. |
lam |
positive tuning parameters for elastic net penalty. If a vector of parameters is provided, they should be in increasing order. Defaults to grid of values |
diagonal |
option to penalize the diagonal elements of the estimated precision matrix (Ω). Defaults to |
crit.out |
criterion for convergence in outer (blockwise) loop. Criterion |
crit.in |
criterion for convergence in inner (lasso) loop. Criterion for convergence. Criterion |
tol.out |
convergence tolerance for outer (blockwise) loop. Defaults to 1e-4. |
tol.in |
convergence tolerance for inner (lasso) loop. Defaults to 1e-4. |
maxit.out |
maximum number of iterations for outer (blockwise) loop. Defaults to 1e4. |
maxit.in |
maximum number of iterations for inner (lasso) loop. Defaults to 1e4. |
adjmaxit.out |
adjusted maximum number of iterations. During cross validation this option allows the user to adjust the maximum number of iterations after the first |
K |
specify the number of folds for cross validation. |
crit.cv |
cross validation criterion ( |
start |
specify |
cores |
option to run CV in parallel. Defaults to |
trace |
option to display progress of CV. Choose one of |
returns list of returns which includes:
lam |
optimal tuning parameter. |
min.error |
minimum average cross validation error (cv.crit) for optimal parameters. |
avg.error |
average cross validation error (cv.crit) across all folds. |
cv.error |
cross validation errors (cv.crit). |
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