deepSampleBaseIds: deepSampleBaseIds
In MPIIComputationalEpigenetics/deepRtools: DEEP R tools
Description
Usage
Arguments
Value
Author(s)
Examples
Description
parses a vector of sample IDs and returns a vector with the base ids (without assay, center and technical replicate fields). Returns the same string if it is not a valid ID.
Usage
1
deepSampleBaseIds(ids, ignore.case = FALSE)
Arguments
ids
a vector of sample ids as strings
ignore.case
flag indicating whether to ignore casing in parsing the sample ids
Value
a vector of sample ids as strings
Author(s)
Fabian Mueller
Examples
1
deepSampleBaseIds(c("43_Hm03_BlMa_TO1_WGBS_E_1","43_Hm05_BlMa_Ct","43_Hm05_BlMa_Ct_NOMe_S_2","01_HepaRG_LiHR_D32","41_Hf01_LiHe_Ct1_H3K4me1_F_1"))
MPIIComputationalEpigenetics/deepRtools documentation built on May 7, 2019, 2:06 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
parses a vector of sample IDs and returns a vector with the base ids (without assay, center and technical replicate fields). Returns the same string if it is not a valid ID.
Usage
1 | deepSampleBaseIds(ids, ignore.case = FALSE)
|
Arguments
ids |
a vector of sample ids as strings |
ignore.case |
flag indicating whether to ignore casing in parsing the sample ids |
Value
a vector of sample ids as strings
Author(s)
Fabian Mueller
Examples
1 | deepSampleBaseIds(c("43_Hm03_BlMa_TO1_WGBS_E_1","43_Hm05_BlMa_Ct","43_Hm05_BlMa_Ct_NOMe_S_2","01_HepaRG_LiHR_D32","41_Hf01_LiHe_Ct1_H3K4me1_F_1"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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