getDeepSampleIdsFromString: getDeepSampleIdsFromString

In MPIIComputationalEpigenetics/deepRtools: DEEP R tools

Description

looks for occurrences of DEEP IDs in a vector of strings and returns them as a list

Usage

getDeepSampleIdsFromString(x, fullId = FALSE, ignore.case = FALSE)

Arguments

x	string vector in which to look for DEEP Ids
fullId	only retrieve full ids
ignore.case	flag indicating whether to ignore casing in parsing the sample ids

Value

a list containing the found DEEP IDs for each element in the string vector

Author(s)

Fabian Mueller

Examples

getDeepSampleIdsFromString(c("blubbsad43_Hm03_BlMa_TO1_WGBS_E_1XXX43_Hm05_BlMa_CtNOI43_Hm05_BlMa_Ct","43_Hm05_BlMa_Ct_NOMe_S_2uiadyf01_HepaRG_LiHR_D32","blubb"))

MPIIComputationalEpigenetics/deepRtools documentation built on May 7, 2019, 2:06 p.m.