blueprint_monocyte_eqtl: Data frame of eQTLs (monocyte cells) from the BLUEPRINT study
In MRCIEU/MRInstruments: Data sources for genetic instruments to be used in MR
Description
Usage
Format
Source
Description
Data was downloaded from ftp://ftp.ebi.ac.uk/pub/databases/blueprint/blueprint_Epivar/qtl_as/QTL_RESULTS/mono_gene_nor_combat_peer_10_all_summary.txt.gz.
Top hit SNPs filtered for (all associations with P<5e-8).
Usage
1
Format
A data frame with 452537 rows and 8 columns
- Phenotype
Gene name
- SNP
SNP rs ID
- beta
Effect size
- se
Standard error
- eaf
Effect allele frequency
- effect_allele
Effect allele
- other_allele
Non effect allele
- pval
p-value
Source
https://scmv-ieugit.epi.bris.ac.uk/gh13047/blueprint_monocyte_tophits
MRCIEU/MRInstruments documentation built on June 24, 2020, 9:34 a.m.
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Description Usage Format Source
Description
Data was downloaded from ftp://ftp.ebi.ac.uk/pub/databases/blueprint/blueprint_Epivar/qtl_as/QTL_RESULTS/mono_gene_nor_combat_peer_10_all_summary.txt.gz. Top hit SNPs filtered for (all associations with P<5e-8).
Usage
1 |
Format
A data frame with 452537 rows and 8 columns
- Phenotype
Gene name
- SNP
SNP rs ID
- beta
Effect size
- se
Standard error
- eaf
Effect allele frequency
- effect_allele
Effect allele
- other_allele
Non effect allele
- pval
p-value
Source
https://scmv-ieugit.epi.bris.ac.uk/gh13047/blueprint_monocyte_tophits
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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