mrbase_instruments: Data frame of GWAS significant SNPs obtained from the EBI...

Description Usage Format Source

Description

Created from the MR-Base database 23/12/2017 The top hits (5e-8) are extracted from these files and then the 1kg European dataset is used to clump the top hits (rsq = 0.001, kb = 10000)

Usage

1

Format

A data frame with 29792 rows and 16 columns

exposure

This phenotype also has units and details if they are necessary to distinguish different studies

id.exposure

id.exposure

samplesize.exposure

samplesize.exposure

ncase.exposure

ncase.exposure

ncontrol.exposure

ncontrol.exposure

mr_keep.exposure

mr_keep.exposure

pval_origin.exposure

pval_origin.exposure

data_source.exposure

data_source.exposure

SNP

SNP

effect_allele.exposure

effect_allele.exposure

other_allele.exposure

other_allele.exposure

beta.exposure

beta.exposure

se.exposure

se.exposure

pval.exposure

pval.exposure

units.exposure

units.exposure

eaf.exposure

eaf.exposure

Source

http://www.mrbase.org


MRCIEU/MRInstruments documentation built on June 24, 2020, 9:34 a.m.