generate_report: generate metaboprep summary html report

In MRCIEU/metaboprep: Metabolomics data preparation and processing pipeline

generate metaboprep summary html report

Description

This function generates the html report.

Usage

generate_report(
  full_path_2_Rdatafile = "ReportData.Rdata",
  dir_4_report = "./",
  path_2_Rmd_template = file.path(system.file("rmarkdown", package = "metaboprep"),
    "metaboprep_Report_v0.Rmd")
)

Arguments

full_path_2_Rdatafile	full path to the Rdatafile
dir_4_report	directory to place the report
path_2_Rmd_template	full path to the html report template

Value

Writes a html report to file

an html file written to file

MRCIEU/metaboprep documentation built on Jan. 28, 2023, 7:29 p.m.