ng_anno: Nightingale Health metabolomics annotation data set

In MRCIEU/metaboprep: Metabolomics data preparation and processing pipeline

Nightingale Health metabolomics annotation data set

Description

A dataset containing annotation data on Nightingale Health NMR metabolites (lipids), compiled from public resources with additional annotation made here. Some metabolites are repeated in the ng_anno data frame as we have observed that Nightingale Health has changed the spellings a few times. Our code and this data frame attempts to capture all possible spellings that we have observed. We note that as Nightingale Health continues to add new metabolites, updates names, modifies names, or changes spellings the automation of the annotation may fail for some features|metabolites.

Usage

ng_anno

Format

A data frame with 291 rows and 7 variables:

metabolite

metabolite id

raw.label

metabolite name and units

class

metabolite annotation class

subclass

metabolite annotation subclass

label

metabolite name and units

label.no.units

metabolite name without units

derived_features

a binary yes|no indicating if the metabolite variable is a variable derived of two or more other features in the data set

...

Source

http://nightingalehealth.com/

MRCIEU/metaboprep documentation built on Jan. 28, 2023, 7:29 p.m.