lib2HGNC: Map all genes in a genesetr library object to HGNC-approved...
In MaayanLab/genesetr: Manipulate, Test, and Visualize Gene Set Overlaps
Description
Usage
Arguments
Value
Examples
View source: R/map_gene_names.R
Description
Map all genes in a genesetr library object to HGNC-approved symbols
Usage
1
lib2HGNC(lib, untranslatable.na = F)
Arguments
lib
a genesetr library object
untranslatable.na
boolean, default is false. If a gene does not have an HGNC
mapping, then the function will return an NA for that gene
Value
a genesetr library object with all genes mapped to approved HGNC symbols
Examples
1
2
lib = genesetr::chea_example
mapped_lib = lib2HGNC(lib, untranslatable.na = T)
MaayanLab/genesetr documentation built on Aug. 14, 2019, 12:20 p.m.
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Description Usage Arguments Value Examples
View source: R/map_gene_names.R
Description
Map all genes in a genesetr library object to HGNC-approved symbols
Usage
1 | lib2HGNC(lib, untranslatable.na = F)
|
Arguments
lib |
a genesetr library object |
untranslatable.na |
boolean, default is false. If a gene does not have an HGNC mapping, then the function will return an NA for that gene |
Value
a genesetr library object with all genes mapped to approved HGNC symbols
Examples
1 2 | lib = genesetr::chea_example
mapped_lib = lib2HGNC(lib, untranslatable.na = T)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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