scData: Sample data for analysis

In Malindrie/scShapes: A Statistical Framework for Modeling and Identifying Differential Distributions in Single-cell RNA-sequencing Data

Sample data for analysis

Description

Toy example data list of scRNA-seq counts, information on covariates, and library sizes for randomly generated 20 genes to illustrate how to use the functions of the package scShapes

Usage

data(scData)

Format

A list of three lists labeled 'counts', 'covariates', 'lib_size'. 'counts' an RNA-seq counts matrix of 20 genes and 500 cells; 'covariates' a dataframe of covariates corresponding to the RNA-seq counts where rows are cells of the counts matrix; 'lib_size' a numeric vector of library sizes corresponding to the columns of the RNA-seq counts matrix.

Value

An RData object

Examples

# load toy  example data

data(scData)

Malindrie/scShapes documentation built on Nov. 21, 2022, 8:58 a.m.