Man pages for MalteThodberg/APhunteR
Find Alternative Promoters in CAGE data
| APclassify | Classify genes based on types of APUs |
| APfit | Fit GLMs at the gene and promoter level |
| APtest | Perform test for APU |
| exampleData | Placeholder example data |
| plot.APclassify | Plot APU classification results |
| plot.APfit | Plot basic statistics for a single gene |
| plot.APtest | Plot DE statistics for a single gene |
| print.APclassify | Print basic info about APclassify |
| print.APfit | #' @export print.APfit <- function(o) message("APfit object... |
| print.APtest | #' @export print.APtest <- function(o) message("APtest object... |
| singleClassify | Internal function: Classify single contrast |
| singleContrast | Internal function: Test single contrast |
| stackLegends | Internal function: Plot a ggplot2 legend over multiple colums |
| stackPlots | Stack multiple single gene plots |
