APclassify: Classify genes based on types of APUs
In MalteThodberg/APhunteR: Find Alternative Promoters in CAGE data
Description
Usage
Arguments
Value
Examples
Description
Classfiy multipromoter genes into 7 classes based on types of APU.
Usage
1
2
APclassify(APtestObject, significanceThreshold = 0.05,
promoterTest = "nested", geneTest = "simes")
Arguments
APtestObject
APtest object.
significanceThreshold
FDR-corrected p-value threshold for significance.
promoterTest
Not yet implemented.
geneTest
Not yet implemented.
Value
APclassify object
Examples
1
# ADD EXAMPLES HERE
MalteThodberg/APhunteR documentation built on May 8, 2019, 3:24 p.m.
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Description Usage Arguments Value Examples
Description
Classfiy multipromoter genes into 7 classes based on types of APU.
Usage
1 2 | APclassify(APtestObject, significanceThreshold = 0.05,
promoterTest = "nested", geneTest = "simes")
|
Arguments
APtestObject |
APtest object. |
significanceThreshold |
FDR-corrected p-value threshold for significance. |
promoterTest |
Not yet implemented. |
geneTest |
Not yet implemented. |
Value
APclassify object
Examples
1 | # ADD EXAMPLES HERE
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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