Description Usage Arguments Value Examples
Uses edgeR to fit a robust QL GLM to promoters and genes
1 | APfit(promoterCounts, modelMatrix, geneIds)
|
promoterCounts |
matrix: Number of CAGE tags in each promoter. |
modelMatrix |
matrix: Full rank model matrix describing the experiment. |
geneIds |
character: Vector marking which genes promoters belong two. |
APfit object
1 | # ADD EXAMPLES HERE
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