add_observations: Add observations to the CRC cell
In MaximeWack/R2b2: R package to manage an i2b2 instance and import data

Add observations to the CRC cell

1	add_observations(observations, project, host = "", admin = "", pass = "")

`observations`	A dataframe of observation facts
`project`	The name of the project
`host`	The host to connect to
`admin`	The admin account for the PostgreSQL database
`pass`	The password for the admin account

The observations dataframe must contain the following columns: - encounter_ide: the original encounter ID - patient_ide: the original patient ID - start_date: the start date of the encounter, as Date object - concept_cd: the concept to insert - provider_id: the provider - modifier_cd: optionnal modifier for the concept Other observation fact columns can optionnaly be included, such as end_date, valtype_cd, tval_char, nval_num, valueflag_cd, units_cd, etc.

MaximeWack/R2b2 documentation built on May 8, 2019, 9:52 a.m.