logitSplines_start: Get the initial estimates for a logistic spline fit by...
In Mengbo-Li/protDP: Estimation of the Detection Probability Curve in Label Free Shotgun Proteomics Data
View source: R/logitSplines_start.R
logitSplines_start R Documentation
Get the initial estimates for a logistic spline fit by assuming the
binomial detection probability
Description
Get the initial estimates for a logistic spline fit by assuming the
binomial detection probability
Usage
logitSplines_start(dp, mu, wt, df = 1)
Arguments
dp
A vector of detection proportion in all precursors.
mu
A vector of average observed intensities in all precursors.
wt
A vector of the numbers of trials (samples size).
df
Degrees of freedom for the natural cubic spline.
Value
A list of fitted coefficients and the basis matrix for a spline with
some degrees of freedom.
Examples
# See the vignettes.
Mengbo-Li/protDP documentation built on Oct. 26, 2023, 9:50 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/logitSplines_start.R
| logitSplines_start | R Documentation |
Get the initial estimates for a logistic spline fit by assuming the binomial detection probability
Description
Get the initial estimates for a logistic spline fit by assuming the binomial detection probability
Usage
logitSplines_start(dp, mu, wt, df = 1)
Arguments
dp |
A vector of detection proportion in all precursors. |
mu |
A vector of average observed intensities in all precursors. |
wt |
A vector of the numbers of trials (samples size). |
df |
Degrees of freedom for the natural cubic spline. |
Value
A list of fitted coefficients and the basis matrix for a spline with some degrees of freedom.
Examples
# See the vignettes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.