API for Miaoyx323/stCancer
stCancer
| Global functions | |
|---|---|
| CellCycleAnalysis | Man page Source code |
| Dim_Plot | Source code |
| Dim_Plot_single | Source code |
| EMTAnalysis | Man page Source code |
| Feature_Plot | Man page Source code |
| Feature_Plot_single | Source code |
| GeneSpatialPlot | Man page |
| InteractionDotPlot | Source code |
| Load_Spatial | Man page Source code |
| Read_Image | Man page Source code |
| RunGlobalMoransI | Source code |
| RunLocalMoransI | Source code |
| RunZscorePvalue | Source code |
| SpatialDim_Plot | Man page Source code |
| SpatialDim_Plot_single | Source code |
| SpatialFeature_Plot | Man page Source code |
| SpatialFeature_Plot_single | Source code |
| SpatialInteraction | Man page Source code |
| SpatialScoring | Man page Source code |
| SpatialStructureDetection | Man page Source code |
| Spatial_Plot | Man page |
| StemnessAnalysis | Man page Source code |
| TLSAnalysis | Man page Source code |
| TumorCharacters | Man page Source code |
| addGeneAnno | Man page |
| anscombeTransform | Source code |
| boundForCNV | Source code |
| build_table_base | Source code |
| cal_complex | Source code |
| cal_mean | Source code |
| callCellPhoneDB | Source code |
| cellTypeScore | Man page Source code |
| centerAcrossChr | Source code |
| clusterBarPlot | Man page Source code |
| combine_spot | Man page Source code |
| denoiseByRefMeanSd | Source code |
| filePathCheck | Man page |
| genePropPlot | Man page Source code |
| geom_spatial | Man page |
| getAverageBounds | Source code |
| getBimodalThres | Source code |
| getDefaultColors | Man page Source code |
| getDefaultDimColors | Man page Source code |
| getDefaultFeatureColors | Man page Source code |
| getGeneManifest | Man page Source code |
| getMalignScore | Source code |
| getMouseGene | Man page Source code |
| getPlotCol | Man page Source code |
| getPointSize | Man page Source code |
| get_neighbors_indices | Source code |
| ggplot_config | Man page Source code |
| grid_arrange_shared_legend | Man page Source code |
| histPlot | Man page Source code |
| histPlot.data.frame | Man page Source code |
| invertLog2 | Source code |
| limitData | Man page Source code |
| logForCNV | Source code |
| malignPlot | Source code |
| myCellPhoneDB | Source code |
| normalizeDataForCNV | Source code |
| plotMalignancy | Man page Source code |
| pointDRPlot | Man page |
| preDEheatmap | Man page Source code |
| prepareCNV | Man page Source code |
| prepareCellPhoneDB | Source code |
| regionprops | Man page Source code |
| removeOutliers | Source code |
| rmGeneForCNV | Source code |
| rm_isolated_spot | Man page Source code |
| runCNV | Source code |
| runCNVAnalysis | Man page Source code |
| runCopyKAT | Man page Source code |
| runInferCNV | Man page Source code |
| runMalignancy | Man page Source code |
| runNMF | Man page Source code |
| smoothByChr | Source code |
| smoothOne | Source code |
| stAnnotation | Man page Source code |
| stStatistics | Man page Source code |
| statistic_method | Source code |
| subtractRefExpr | Source code |
