ggbootPW: Pair-wise comparisons plot

In MiguelRodo/ggboot: Bootstrap univariate and multivariate plots

Pair-wise comparisons plot

Description

Plot the estimates or maximum Bayes factors (MBFs) pair-wise comparisons in terms of a summary statistic between all levels of a factor. BCa bootstrapping is used to obtain the maximum Bayes factor.

Usage

ggbootPW(data, resp, group, facet = NULL, B = 100, seB = 10,
  calcStat = "mean", trim = 0.2, fdr = NULL, minEff = 0,
  groupLabVec = NULL, facetLabVec = NULL, axisLab = NULL, ncol = 2,
  facetOrderVec = NULL, rotX = FALSE, method = "percT",
  facetScale = "fixed", text = TRUE, textSize = 3, plotTblName = NULL,
  plot = TRUE, fillLabVec = NULL, fillColVec = NULL, sort = TRUE)

Arguments

data	dataframe. Has one row per observation and the column names specified below.
resp	unquoted expression. Response variable name.
group	unquoted expression. Group variable name.
facet	unquoted expression. Facet variable name.
B	integer. Number of bootstrap repetitions. If greater than 0, the plot displays the MBF rather than the estimate of the difference. If 0, then no bootstrapping is performed and the sample values for calcStat are displayed.
calcStat	function olr character. Bootstrap statistic function. Functions other than mean or median used at own risk.
fdr	numeric. False discovery rate.
minEff	numeric. Minimum effect size. Default is 0.
groupLabVec	named character vector. Labels for grouping vector. Optional.
axisLab	character. X- and y-axis titles.
ncol	integer. Number of facet variable columns.
rotX	logical. If TRUE, x-axis titles are rotated 90 degrees.
facetScale	'fixed' or 'free'. Input for scale argument of ggboot::facet_wrap. Forced to 'free' if sort=TRUE.
text	logical. If TRUE, the difference estimates or MBFs are written over each grid point.
textSize	numeric. Size of text.
plotTblName	character. If not NULL, then the dataframe used to plot is saved to global environment with name plotTblName.
plot	logical. If TRUE, then a plot is outputted.
scale	logical. Whether to sort x- and y-axes text by size of response. Default is TRUE.

MiguelRodo/ggboot documentation built on Nov. 9, 2023, 5:45 p.m.