Man pages for MikeKSmith/MSToolkit
The MSToolkit Library For Clinical Trial Design

addResidualErrorAdd residual error to the response.
allocateTreatmentsAllocate treatment to subjects
analyzeDataAnalyze simulated data replicates
analyzeRepAnalyse a single replicate of data
applyPredCodeParses and applys NONMEM statements
calculateDiffsFromBaseCalculate differences from baseline
calculateObsSummaryCalculate Observed Data Summary
calculateSimTrialMeansCalculate Simulated Trial Means
checkColNamesCheck that column names are found in a data frame
checkDropOutFuncheck the user supplied drop out function
checkMacroFormatCheck the macro format dataset
checkMicroFormatCheck that an input data structure is a valid "Micro...
checkSimAlphaParse alpha value
checkSymmetricPDMatrixChecks if a matrix is symmetric and positive definite
compileSummaryCompile all Micro or Macro evaluation data
convertSASIncludeRowsCreate a SAS 'IF' statement
convertToSASCodeConvert R to SAS Statements
createContinuousCovariatesCreate a set of continuous covariates
createCovariatesCreate covariates
createDirectoriesCreate replicate data, micro evaluation, and macro evaluation...
createDiscreteCovariatesCreate covariates from a discrete distribution
createDropoutAdds dropout to a simulated dataset
createEmptyMicroCreate an empty micro evaluation data frame
createExternalCovariatesCreate covariates by sampling from an external file
createExternalParametersSample parameters from an external file
createInterimsCreate the interim flag
createMCARMissing Completely at Random
createNmMatrixCreates a matrix based on a "NONMEM style" vector
createNormalParametersCreate parameters based on a multivariate normal distribution
createParametersCreates parameters for subjects in each replicate
createResponseHigh-level function for the response component.
createResponseVariableCreate a response from a data set and an equation
createTimeVaryingCovariatesCreate a set of time-varying covariates
createTreatmentsCreate Treatment Design Data
createTvDefinitionCreate "Typical Value" Definition
ectdStopError handling functions for the ectd package.
generateDataGenerate simulated data replicates
getEctdColNameControl of default column names
getReplicatesTrial replicates vector
initialCharConvert the first letter that occurs in a string to lower...
interimAnalysisinterim Analysis
macroEvaluationMacro Evaluation
MSToolkit-packageMSToolkit: The MSToolkit Library For Clinical Trial Design
parseCharInputParse a comma seperated string
parseCovMatrixParse a covariance matrix
parseHashStringProcess a string seperated by hash symbols or a vector (or...
parseRangeCodeParse a numerical range expression
parseRCodeParse R Code
performAnalysisRuns the analysis code against one dataset
readAllDataRead scenario data
readDataRead scenario data
removeDirectoriesRemove directories
setEctdDataMethodCurrent data storage method
setEctdExternalPathControls paths to a set of external execution paths
setEctdVerboseMSToolkit package options
summarizeTrialMeansSummarize Trial Mean Data
validNamesCheck if a character string is a valid R variable name
writeDataWrite scenario data
writeLogFileWrite a job log file
MikeKSmith/MSToolkit documentation built on July 3, 2024, 1:53 a.m.