Militeee/rcongas: Copy Number Alterations genotyping from single-cell multiomics

This package provides an interface, implemented through reticulate, to the CONGAS Python package; thus acting as an easy frontend to work from R and run the Pyro models available in CONGAS. While it should be callsed (R)CONGAS+, for simplicity we keep calling it just Rcongas. The package contains anumber of functions to input and pre-process single-cell datasets, to compute fits through the Pyro modules in Python, as well as to visualise and post-process fits within R.

Getting started

Package details

MaintainerCancer Data Science Laboratory <gcaravagn@gmail.com>
LicenseGPL (>= 3)
Version0.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Militeee/rcongas")
Militeee/rcongas documentation built on Nov. 1, 2024, 2:38 a.m.