divide_genome_in_segments: A simple function to divide the genome in segments
In Militeee/rcongas: Copy Number Alterations genotyping from single-cell multiomics
divide_genome_in_segments R Documentation
A simple function to divide the genome in segments
Description
The functions first finds the maximum number of segments of a given length for each chromosome in the
human genome (hg38 assembly, onlys chrs 1:22, X and Y) then it sample the number of actual splits
in a range (0,MAX). In the end it adds some stochasticity to the segment ends and starts.
Usage
divide_genome_in_segments(approx_length = 1e+08)
Arguments
approx_length
Approximate segment legnth. Integer
Value
A data frame with genomic segments (with 3 cols chr, from, to)
Militeee/rcongas documentation built on Nov. 1, 2024, 2:38 a.m.
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| divide_genome_in_segments | R Documentation |
A simple function to divide the genome in segments
Description
The functions first finds the maximum number of segments of a given length for each chromosome in the human genome (hg38 assembly, onlys chrs 1:22, X and Y) then it sample the number of actual splits in a range (0,MAX). In the end it adds some stochasticity to the segment ends and starts.
Usage
divide_genome_in_segments(approx_length = 1e+08)
Arguments
approx_length |
Approximate segment legnth. Integer |
Value
A data frame with genomic segments (with 3 cols chr, from, to)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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