change_spot: Add a deletion or an insertion in a given segment
In Militeee/rcongas: Copy Number Alterations genotyping from single-cell multiomics
change_spot R Documentation
Add a deletion or an insertion in a given segment
Description
Add a deletion or an insertion in a given segment
Usage
change_spot(parent_ploidy, mutation_spots, changes)
Arguments
parent_ploidy
vector of integers, CNV value in the parent clone
mutation_spots
vector of integers, index of the segmnts to be changed in the parent
changes
list of integers, indicating for each ploidy status the allowed changes (e.g., list('1' = c(1,2)) since we cannot go to 0 copies)
Value
the vector with the new subclonal ploidy
Militeee/rcongas documentation built on Nov. 1, 2024, 2:38 a.m.
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| change_spot | R Documentation |
Add a deletion or an insertion in a given segment
Description
Add a deletion or an insertion in a given segment
Usage
change_spot(parent_ploidy, mutation_spots, changes)
Arguments
parent_ploidy |
vector of integers, CNV value in the parent clone |
mutation_spots |
vector of integers, index of the segmnts to be changed in the parent |
changes |
list of integers, indicating for each ploidy status the allowed changes (e.g., list('1' = c(1,2)) since we cannot go to 0 copies) |
Value
the vector with the new subclonal ploidy
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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