Files in MingweiWilliamTang/LNAphyloDyn
Bayesian inference on coalescent-based phylodynamics using linear noise approximation

.Rbuildignore
.gitignore
DESCRIPTION
LNAPhyloDyn.Rproj
LNAstan/Changepoint_test.stan
LNAstan/LNA_Stan_V1.stan
LNAstan/LNA_Stan_V2.stan
LNAstan/LNA_Stan_V3.stan
LNAstan/LNA_Stan_V4.stan
LNAstan/LNA_Stan_V5.stan
LNAstan/LNA_Stan_change_point.stan
LNAstan/LNAstan.stan
LNAstan/OdeStan.stan
NAMESPACE
R/#testfuntions.R#
R/ESliceSampling.R R/LNAPhyloDyn-package.R R/LNA_chpt_slice.R R/Period_MCMC.R R/RcppExports.R R/SIR_BD_MCMC.R R/SIR_LNA_MCMC_log.R R/SIR_LNA_standard.R R/StructuralMCMC.R R/basic.R R/coal_simulation.R R/general_change_point.R R/plotfuns.R R/stan_init.R R/testfuntions.R README.md
all.Rout
man/ESlice.Rd man/Like_Free.Rd man/MCMC_initialize.Rd man/SIR_LNA_ESlice_MCMC.Rd man/SIR_LNA_ESlice_MCMC2.Rd man/SIR_LNA_ESlice_MCMC4.Rd
src/.gitignore
src/LNA_NS_general.cpp
src/LNA_functional.cpp
src/LNA_functional.h
src/RcppExports.cpp
src/SIRS.cpp
src/SIRS_period.cpp
src/SIR_BD.cpp
src/SIR_LNA.cpp
src/SIR_LNA.h
src/SIR_log_LNA.cpp
src/SIR_log_LNA.h
src/SIR_phylodyn.cpp
src/SIR_phylodyn.h
src/StructuralCoal.cpp
src/basic_util.cpp
src/basic_util.h
src/generalLNA.cpp
tests/testthat.R tests/testthat/testStructureCoal.R
MingweiWilliamTang/LNAphyloDyn documentation built on Dec. 6, 2017, 5:39 a.m.