README.md

MmCMS: an R package for consensus molecular subtyping of mouse colorectal cancer models.

MmCMS package calls CMS subtypes in mouse tissues. The core algorithm is Nearest Template Prediction (NTP) and CMScaller [Guinney 2015; Eide 2017; Hoshida 2010].

Install

Run the following code in R/RStudio to install the package:

#install.packages("devtools") #devtools::install_github("MolecularPathologyLab/MmCMS")



MolecularPathologyLab/MmCMS documentation built on Oct. 18, 2023, 10:42 p.m.