This function produces graphics based on the statistical distributions of the original sam-files and the sam-files produced by mapping of the simulated fastq-files
which are generated by the function
sim_init with parameters "init" and "sim".
The function plots distributions of nucleotide, mapping quality, read length, start position and quality value of all mapped viruses together and top three mapped viruses
for both types of sam-files and writes the plots into one pdf-file.
Indices of the sam-files to produce graphics of
Before using the function
sim_init_graphics, the functions
sim_init with parameters "init" and "sim" must be executed.
sim_sam_graphics ( file_indices = 1 )
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.